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Institute of Aquatic Ecology



Institute of Aquatic Ecology

Campus de Montilivi mapa
M. Aurèlia Capmany 69
17003 Girona, Spain
Tel. +34 972 41 82 66
Fax +34 972 41 81 50
How to find us?


Journal publications

    Vilar-Sanz, A.; Puig, S.; García-Lledó, A.; Trias, R.; Balaguer, M.D.; Colprim, J.; Banyeras, Ll.  "Does syntrophy exist on denitrifying biocathodes?."  Communications in Agricultural and Applied Biological Sciences  77 (2012):  21-21.


    Alba Ceballos-Escalera; Narcís Pous; Paola Chiluiza-Ramos; Benjamin Korth; Falk Harnisch; Lluís Bañeras; M. Dolors Balaguer; Sebastià Puig  "Electro-bioremediation of nitrate and arsenite polluted groundwater."  Water Research  190 (2021):  -.
    Ana Carolina Maganha de Almeida Kumlien; Carles M. Borrego; J.L. Balcázar  "Antimicrobial Resistance and Bacteriophages: An Overlooked Intersection in Water Disinfection."  Trends in Microbiology   (2021):  -.
    Magrí, A.; Company, E.; Gich, F.; Colprim, J.  "Hydroxyapatite formation in a single-stage anammox-based batch treatment system: Reactor performance, phosphorus recovery and microbial community."  Acs Sustainable Chemistry & Engineering  9 (2021):  2745-2761.
    Núria Catalán; Ada Pastor; Carles M. Borrego; Jeffrey A. Hawkes; Carmen Gutiérrez; Daniel von Schiller; Joan Pere Casas-Ruiz; Rafael Marcé  "The relevance of environment vs. composition on dissolved organic matter degradation in freshwaters."  Limnology and Oceanography  66 (2021):  306-320.
    Beatriz B. Oliveira; Bruno Veigas; Fábio Ferreira Carlos; Alexandre Sánchez-Melsió; José Luís Balcázar; Carles M. Borrego; Pedro Viana Baptista  "Water safety screening via multiplex LAMP-Au-nanoprobe integrated approach."  Science of the Total Environment  741 (2020):  1404-.
    Borrego, Carles, Sabater, Sergi*, Proia, Lorenzo  "Lifestyle preferences drive the structure and diversity of bacterial and archaeal communities in a small riverine reservoir."  Scientific Reports  10 (2020):  -.
    Cristina Ávila; María J. García-Galán; Carles M. Borrego; Sara Rodríguez-Mozaz; Joan García; Damià Barceló  "New insights on the combined removal of antibiotics and ARGs in urban wastewater through the use of two configurations of vertical subsurface flow constructed wetlands."  Science of the Total Environment  755 (2020):  142554-.
    E. Forés; S. Bofill-Mas; M. Itarte; S. Martínez-Puchol; A. Hundesa; M. Calvo; C.M. Borrego; L. Corominas; R. Girones; M. Rusiñol  "Evaluation of two rapid ultrafiltration-based methods for SARS-CoV-2 concentration from wastewater."  Science of the Total Environment  768 (2020):  144786-.
    Ellana Boada, Eric Santos-Clotas, Salvador Bertran, Alba Cabrera-Codony, Maria J. Martín, Lluís Bañeras, Frederic Gich  "Potential use of Methylibium sp. as a biodegradation tool in organosilicon and volatile compounds removal for biogas upgrading."  Chemosphere  240 (2020):  -.
    Fabrizio Pantanella; I. Lekunberri; A. Gagliardi; G. Venuto; A. Sànchez-Melsió; M. Fabiani; J.L. Balcázar; S. Schippa; M. De Giusti; C.M. Borrego; A. Solimini  "Effect of Urban Wastewater Discharge on the Abundance of Antibiotic Resistance Genes and Antibiotic-Resistan Escherichia coli in Two Italian Rivers."  International Journal of Environmental Research and Public Health  17 (2020):  6813-.
    Gionchetta G.; Oliva F.; Romaní A.M.; Bañeras L.  "Hydrological variations shape diversity and functional responses of streambed microbes."  Science of the Total Environment  714 (2020):  -.
    Giulia Gionchetta; Mireia Fillol; Alexandre Sànchez-Melsió; Oriol Gutiérrez; José Luis Balcázar; Carles M. Borrego  "Side effects of free nitrous acid on the sewer resistome and mobilome."  Chemical Engineering Journal  455 (2020):  126657-.
    Hernández-del Amo, E.; Dolinová, I.; Ramis-Jorba, G.; Gich, F.; Bañeras, L.  "Limited effect of radial oxygen los over ammonia oxidizers on Typha angustifolia root hairs."  Scientific Reports  10 (2020):  -.
    Hernández-del Amo, Elena; Bañeras, Lluís  "Effects of high nitrate input in the denitrification-DNRA activities in the sediment of a constructed wetland under varying C/N ratios."  Ecological Engineering   (2020):  -.
    Pastor, A., Hernández-Del Amo, E., Giménez-Grau, P., Fillol, M., Pereda, O., Flores, L., Sanpera-Calbet, I., Bravo, A.G., Martín, E.J., Poblador, S., Arroita, M., Rasines-Ladero, R., Ruiz, C., Del Campo, R., Abril, M., Reyes,  "Early-Career Coordinated Distributed Experiments: Empowerment Through Collaboration."  Frontiers in Education  5 (2020):  1-7.
    Perona-Vico, E.; Feliu-Paradeda, L.; Puig, S.; Bañeras, L.  "Bacteria coated cathodes as an in‑situ hydrogen evolving platform for microbial electrosynthesis."  Scientific Reports  10 (2020):  -.
    Rovira-Alsina, L., Perona-Vico, E., Bañeras, Ll., Colprim, J., Balaguer, M.D. and Puig, S.  "Thermophilic bio-electro CO2 recycling into organic compounds."  Green Chemistry  22 (2020):  2947-2955 .
    Sergi Compte-Port; Mireia Fillol; Frederic Gich; Carles M. Borrego  "Metabolic versatility of freshwater sedimentary archaea feeding on different organic carbon sources."  PLoS One  15 (2020):  e0231238-.
    Argudo María; Gich Frederic; Bonet Berta; Espinosa Carmen; Gutiérrez Marina; Guasch Helena.  "Responses of resident (DNA) and active (RNA) microbial communities in fluvial biofilms under different polluted scenarios."  Chemosphere  242 (2019):  -.
    Elisabet Perona-Vico; Ramiro Blasco-Gómez; Jesús Colprim; Sebastià Puig; Lluis Bañeras  "[NiFe]-hydrogenases are constitutively expressed in an enriched Methanobacterium sp. population during electromethanogenesis."  PLoS One  14 (2019):  e0215029-.
    Eric Santos-Clotas; Alba Cabrera-Codony; Ellana Boada; Frederic Gich; Raúl Muñoz; Maria J. Martin  "Efficient removal of siloxanes and volatile organic compounds from sewage biogas by an anoxic biotrickling filter supplemented with activated carbon."  Bioresource Technology  294 (2019):  -.
    Gros M.; Marti E.; Balcázar J.L.; Boy-Roura M.;Busquets A.; Colón J.; Sànchez-Melsió A.; Lekunberri I.; Borrego C.M.;Ponsá S.; Petrovic M.  "Fate of pharmaceuticals and antibiotic resistance genes in a full-scale on-farm livestock waste treatment plant."  Journal of Hazardous Materials   (2019):  120716-.
    Hernández-del Amo, E.; Ramió-Pujol, S.; Gich, F.; Trias, R.; Bañeras, L.  "Changes in the potential activity of nitrite reducers and the microbial community structure after sediment dredging and plant removal in the Empuriabrava FWS-CW."  Microbial Ecology   (2019):  -.
    R. Blasco-Gómez; S. Ramió-Pujol; L. Bañeras; J. Colprim; M. D. Balaguer; S. Puig  "Unravelling the factors that influence the bio-electrorecycling of carbon dioxide towards biofuels."  Green Chemistry  21 (2019):  684-691.
    Subirats J.; Di Cesare A.; Varela della Giustina S.; Fiorentino A.; Ecker E.M.; Rodriguez-Mozaz S.; Borrego C.M.; Corno G.  "High-quality treated wastewater causes remarkable changes in natural microbial communities and intI1 gene abundance."  Water Research  167 (2019):  -.
    Akaboci, T. R. V; Gich, F.; Ruscalleda, M.; Balaguer, M. Dolors; Colprim, J.  "Assessment of operational conditions towards mainstream partial nitritation-anammox stability at moderate to low temperature: reactor performance and bacterial community."  Chemical Engineering Journal  350 (2018):  192-200.
    Ariadna Vilar-Sanz; Narcís Pous; Sebastià Puig; M. Dolors Balaguer; Jesús Colprim; Lluís Bañeras  "Denitrifying nirK-containing alphaproteobacteria exhibit different electrode driven nitrite reduction capacities."  Bioelectrochemistry  121 (2018):  74-83.
    Cantos-Parra, Ester; Ramió-Pujol, Sara; Colprim, Jesús; Puig, Sebastià ; Bañeras, Lluís  "Specific detection of 'Clostridium autoethanogenum', Clostridium ljungdahlii and Clostridium carboxidivorans in complex bioreactor samples."  FEMS Microbiology Letters  365 (2018):  fny191-.
    E. O'Flaherty; C.M. Borrego; J.L. Balcázar; E. Cummins  "Human exposure assessment to antibiotic-resistant Escherichia coli through drinking water."  Science of the Total Environment  616-617 (2018):  1356-1364.
    Elena Hernández-del Amo; Anna Menció; Frederic Gich; Josep Mas-Pla; Lluís Bañeras  "Isotope and microbiome data provide complementary information to identify natural nitrate attenuation processes in groundwater."  Science of the Total Environment   (2018):  579-591.
    Elissavet Kassotaki; Maite Pijuan; Adriano Joss; Carles M. Borrego; Ignasi Rodriguez-Roda; Gianluigi Buttiglieri  "Unraveling the potential of a combined nitritation-anammox biomass towards the biodegradation of pharmaceutically active compounds."  Science of the Total Environment  624 (2018):  722-731.
    I. Lekunberri; J.L. Balcázar; C.M. Borrego  "Metagenomic exploration reveals a marked change in the river resistome and mobilome after treated wastewater discharges."  Environmental Pollution  234 (2018):  538-542.
    Jessica Subirats, Xisca Timoner; Alexandre Sànchez-Melsió; José Luis Balcázar; Vicenç Acuña; Sergi Sabater; Carles Borrego  "Emerging contaminants and nutrients synergistically affect the spread of class 1 integron-integrase (intI1) and sul1 genes within stable streambed bacterial communities."  Water Research  138 (2018):  77-85.
    Obrador B.; von Schiller D.; Marcé R.;, Gómez-Gener L.; Koschorreck M.; Borrego C.M.; Catalán N.  "Dry habitats sustain high CO2 emissions from temporary ponds across seasons."  Scientific Reports   (2018):  3015-.
    Pastor A.; Catalán N.; Nagar N.; Light T.; Borrego C.M.; Marcé R.  "A universal bacterial inoculum for dissolved organic carbon biodegradation experiments in freshwaters."  Limnology and Oceanography: Methods  16 (2018):  421-433.
    Proia L.; Anzil A; Borrego C.M.; Farré M; Llorca M; Sanchís J.; Bogaerts P.; Balcázar J.L.; Servais P.  "Occurrence and persistence of carbapenemases genes in hospital and wastewater treatment plants and propagation in the receiving river."  Journal of Hazardous Materials   (2018):  33-43.
    Proia L.; Anzil A; Subirats J; Borrego C.M.; Farré M; Llorca M; Balcázar J.L.; Servais P.  "Antibiotic resistance in urban and hospital wastewaters and their impact on a receiving freshwater ecosystem."  Chemosphere   (2018):  70-82.
    Proia, A., Anzil, A., Subirats, J., Borrego, C.M., Farrè, M., Llorca, M., Balcázar, J.L., and Servais, P.,  "Antibiotic resistance along an urban river impacted by treated wastewaters."  Science of the Total Environment  628-629 (2018):  453-466.
    Ramió-Pujol, Sara; Ganigué, Ramon; Bañeras, Lluís; Colprim, Jesús  "Effect of ethanol and butanol on autotrophic growth of model homoacetogens."  FEMS Microbiology Letters  365 (2018):  fny084-.
    Tiago Rogerio Vitor Akaboci; Frederic Gich; Maël Ruscalleda; M. Dolors Balaguer; Jesús Colprim  "Effects of extremely low bulk liquid DO on autotrophic nitrogen removal performance and NOB suppression in side‐ and mainstream one‐stage PNA."  Journal of Chemical Technology and Biotechnology  93 (2018):  2931-2941.
    Ada Pastor, Anna Lupon, Lluís Gómez-Gener, Tamara Rodríguez-Castillo, Meritxell Abril, María Isabel Arce, Ibon Aristi, Maite Arroita, Andrea G. Bravo, Núria de Castro-Català, Rubén del Campo, Joan Pere Casas-Ruiz, Edurne Esté  "Local and regional drivers of headwater stream metabolism: insights from the first AIL collaborative project."  Limnética  36 (2017):  67-85.
    Batlle-Vilanova, Pau; Ganigué, Ramon; Ramió-Pujol, Sara; Bañeras, Lluís; Jiménez, Gerard; Hidalgo, Manuela; Balaguer, M. Dolors; Colprim, Jesús; Puig, Sebastià  "Microbial electrosynthesis of butyrate from carbon dioxide: production and extraction."  Bioelectrochemistry  117 (2017):  57-64.
    E. Nasri; J. Subirats; A. Sànchez-Melsió; H. Ben Mansour; C.M. Borrego; J.L. Balcázar  "Abundance of carbapenemase genes (blaKPC, blaNDM and blaOXA-48) in wastewater effluents from Tunisian hospital."  Environmental Pollution   (2017):  371-374.
    I. Lekunberri; J.L. Balcázar; C.M. Borrego  "Detection and quantification of the plasmid-mediated mcr-1 gene conferring colistin resistance in wastewater.."  International Journal of Antimicrobial Agents  50 (2017):  734-736.
    Jèssica Subirats; Xavier Triadó-Margarita; Ladislav Mandaric; Vicenç Acuña; José Luis Balcázar; Sergi Sabater; C.M. Borrego  "Wastewater pollution differently affects the antibiotic resistance gene pool and biofilm communities across streambed compartments."  Molecular Ecology  26 (2017):  5567-5581.
    Lekunberri, Itziar; Subirats, Jéssica; Borrego i Moré, Carles; Balcázar, José Luis  "Exploring the contribution of bacteriophages to antibiotic resistance."  Environmental Pollution  220 (2017):  981-984.
    O. Auguet; M. Pijuan; C.M. Borrego, S. Rodríguez-Mozaz; X. Triadó-Margarit; S. Varela Della Giustina; O. Gutiérrez  "Sewers as potential reservoirs of antibiotic resistance."  Science of the Total Environment   (2017):  1047-1054.
    Puig, S.; Ganigué, R.; Batlle-Vilanova, P.; Balaguer, M.D.; Bañeras, Ll.; Colprim, J.  "Tracking bio-hydrogen-mediated production of commodity chemicals from carbon dioxide and renewable electricity."  Bioresource Technology  228 (2017):  201-209.
    Sergi Compte-Port; Jèssica Subirats; Mireia Fillol; Alexandre Sànchez-Melsió; Rafael Marcé; Pedro Rivas-Ruiz; Antoni Rosell-Melé; Carles M. Borrego  "Abundance and co-distribution of widespread marine archaeal lineages in surface sediments of freshwater water bodies across the iberian peninsula."  Microbial Ecology   (2017):  1-12.
    Auguet O.; Pijuan M.; Borrego C.M.; Gutierrez O.  "Control of sulfide and methane production in anaerobic sewer systems by means of Downstream Nitrite Dosage."  Science of the Total Environment  550 (2016):  1116-1125.
    Fillol, M.; J.-C. Auguet; E. O. Casamayor; C. M. Borrego  "Insights in the ecology and evolutionary history of the Miscellaneous Crenarchaeotic Group lineage."  ISME Journal  10 (2016):  665-677.
    Graham EB; Knelman JE; Schindlbacher A; Siciliano S; Breulmann M; Yannarell A; Beman JM; Abell G; Philippot L; Prosser J; Foulquier A; Yuste JC; Glanville HC; Jones DL; Angel R; Salminen J; Newton RJ; Bürgmann H; Ingram LJ; H  "Microbes as engines of ecosystem function: when does community structure enhance predictions of ecosystem processes?."  Frontiers in Microbiology  7 (2016):  -.
    Ikbel Denden Rafraf; Itziar Lekunberri; Alexandre Sànchez-Melsió; Mahjoub Aouni; Carles M. Borrego; José Luís Balcázar  "Abundance of antibiotic resistance genes in five municipal wastewater treatment plants in the Monastir Governorate, Tunisia."  Environmental Pollution  219 (2016):  353-358.
    Subirats, J.; Sànchez-Melsió, A.; Borrego, C.M.; Balcázar, J.L.; Simonet, P.   "Metagenomic analysis reveals that bacteriophages are reservoirs of antibiotic resistance genes."  International Journal of Antimicrobial Agents  48 (2016):  163-167.
    Vilajeliu-Pons, Anna; Bañeras, Lluis; Puig, Sebastià; Molognoni, Daniel; Vilà-Rovira, Albert; Hernández-del Amo, Elena; Balaguer, Maria Dolor; Colprim, Jesús  "External resistances applied to MFC affect core microbiome and swine manure treatment efficiencies."  PLoS One  11 (2016):  e0164044-.
    A. Vilajeliu-Pons; S. Puig; N. Pous; I. Salcedo-Dávila; L. Bañeras; M. Dolors Balaguer; J. Colprim  "Microbiome characterisation of MFCs used for the treatment of swine manure."  Journal of Hazardous Materials  288 (2015):  60-68.
    Auguet, Olga; Pijuan, Maite; Guasch-Balcells, Helena;; Borrego, Carles; Gutiérrez, Oriol  "Implications of downstream nitrate dosage in anaerobic sewers to control sulfide and methane emissions."  Water Research  68 (2015):  522-532.
    Fillol, Mireia; Sànchez Melsió, Alexandre; Gich Batlle, Frederic; Borrego i Moré, Carles   "Diversity of Miscellaneous Crenarchaeotic Group archaea in freshwater karstic lakes and their segregation between planktonic and sediment habitats."  FEMS Microbiology Ecology  91 (2015):  fiv020-.
    Llirós, M.; García Armisen, T.; Darchambeau, F.; Morana, C.; Triadó Margarit, X.; Inceoğlu, O.; Borrego, C.M.; Bouillon, S.; Servais, P.; Borges, A.V.; Descy, J.-P.; CanfieldD.E.; Crowe, S.A.  "Pelagic photoferrotrophy and iron cycling in a modern ferrugineous basin."  Scientific Reports  5 (2015):  -.
    Llorens-Marès, T.; Triadó-Margarit, X.; Borrego, C.M.; Dupont, C.L.; Casamayor, E.O.  "High bacterial diversity and phylogenetic novelty in dark euxinic freshwaters analyzed by 16S tag community profiling."  Microbial Ecology  71 (2015):  566-574.
    Noguerola, I.; Picazo, A.; Llirós, M.; Camacho, A.; Borrego, C.M.  "Diversity of freshwater Epsilonproteobacteria and dark inorganic carbon fixation in the sulphidic redoxcline of a meromictic karstic lake."  FEMS Microbiology Ecology  91 (2015):  1-15.
    Pous Rodríguez, Narcís; Carmona Martínez, Alessandro A.; Vilajeliu Pons, Anna; Fiset, Erika; Bañeras Vives, Lluís; Trably, Eric; Balaguer i Condom, Maria Dolors; Colprim Galceran, Jesús; Bernet, Nicolas; Puig Broch, Sebastià  "Bidirectional microbial electron transfer: switching an acetate oxidizing biofilm to nitrate reducing conditions."  Biosensors and Bioelectronics  75 (2015):  352-358.
    Proia, L., von Schiller, D., Sànchez-Melsió, A., Sabater, S., Borrego, C.M., Rodríguez-Mozaz, S., Balcázar, J.L.  "Occurrence and persistence of antibiotic resistance genes in river biofilms after wastewater inputs in small rivers."  Environmental Pollution  210 (2015):  121-128.
    Ramió-Pujol, S.; Ganigué, R; Bañeras, L.; Colprim, J.  "Incubation at 25° C prevents acid crash and enhances alcohol production in Clostridium carboxidivorans P7."  Bioresource Technology  192 (2015):  296-303.
    Ramon Ganigué; Sara Ramió-Pujol; Patricia Sánchez; Lluís Bañeras; Jesús Colprim  "The Syngas Platform: Transforming Sewage Sludge into Products with Added Value."  Water Science and Technology   (2015):  -.
    Sara Rodríguez-Mozaz; Sara Chamorro; Elisabet Marti; Belinda Huerta; Meritxell Gros; Alexandre Sànchez-Melsió; Carles M. Borrego; Damià Barceló; José Luís Balcázar  "Occurrence of antibiotics and antibiotic resistance genes in hospital and urban wastewaters and their impact on the receiving river."  Water Research  69 (2015):  234-242.
    Tomàs Llorens-Mares; Shibu Yooseph; Johannes Goll; Jeff Hoffman; Maria Vila-Costa; Carles M. Borrego; Chris L. Dupont, Emili O. Casamayor;   "Connecting biodiversity and potential functional role in modern euxinic environments by microbial metagenomics."  ISME Journal  9 (2015):  1648-1661.
    Batlle Vilanova, Pau; Puig Broch, Sebastià; González Olmos, Rafael; Vilajeliu Pons, Anna; Bañeras Vives, Lluís; Balaguer i Condom, Maria Dolors; Colprim Galceran, Jesús  "Assessment of biotic and abiotic graphite cathodes for hydrogen production in microbial electrolysis cells ."  International Journal of Hydrogen Energy  39 (2014):  1297-1305.
    Isabel Ferrera; Carles M. Borrego; Guillem Salazar; Josep Mª Gasol   "Marked seasonality of aerobic anoxygenic phototrophic bacteria in the coastal NW Mediterranean Sea as revealed by cell abundance, pigment concentration and pyrosequencing of pufM gene."  Environmental Microbiology  16 (2014):  2953-2965.
    J. Gabarró; González-Cárcamo, P.; Ruscalleda, M.; Ganigué, R.; Gich, F.; Balaguer, M.D.; Colprim, J.;  "Anoxic phases are the main N2O contributor in partial nitritation reactors treating high nitrogen loads with alternate aeration ."  Bioresource Technology  163 (2014):  92-99.
    López-Flores, R.; Quintana, X.D.; Romaní, A.M.; Bañeras, Ll.; Ruiz-Rueda, O.; Compte, J.; Green, A.J. Egozcue, J.J.  "A compositional analysis approach to phytoplankton composition in coastal Mediterranean wetlands: Influence of salinity and nutrient availability."  Estuarine, Coastal and Shelf Science  136 (2014):  72-81.
    Ramió-Pujol, S.; Ganigué, R; Bañeras, L.; Colprim, J.  "Impact of formate on growth and productivity of Clostridium carboxidivorans P7 and Clostridium ljungdahlii PETC grown on syngas. ."  International Microbiology   (2014):  -.
    Romaní, A.M.; Borrego, C.; Díaz-Villanueva, V.; Freixa, A; Gich, F.; Ylla, I.  "Shifts in microbial community structure and function in light and dark grown biofilms driven by warming."  Environmental Microbiology  16 (2014):  2550-2567.
    Timoner, Xisca; Borrego, Carles M.; Acuña, Vicenç; Sabater, Sergi  "The dynamics of biofilm bacterial communities is driven by flow wax and wane in temporary streams."  Limnology and Oceanography  59 (2014):  2057-2067.
    Bañeras, L.; Trias, R.; Godayol, A.; Cerdan, L.; Nawrath, T.; Schulz, S.; Anticó, E.  "Mass spectrometry identification of alkyl-substituted pyrazines produced by Pseudomonas spp. Isolates obtained from wine corks."  Food Chemistry  138 (2013):  2382-2389.
    Cáliz, J.; Montserrat, G.; Martí, E.; Sierra, J.; Cung, A.P.; Morais, P.; Vila, X.  "Emerging resistant microbiota from an acidic soil exposed to toxicity of Cr, Cd and Pb is influenced by the bioavailability of these metals."  Journal of Soils and Sediments  13 (2013):  413-428.
    Jordi Gabarró; Elena Hernandez-del Amo; Frederic Gich; Mael Ruscalleda; Marilós Balaguer; Jesús Colprim  "Nitrous oxide reduction genetic potential from the microbial community of an intermittently aerated partial nitritation SBR treating mature landfill leachate ."  Water Research  47 (2013):  7066-7077.
    Llirós, Marc; Trias, Rosalia; Borrego, Carles; Bañeras, Lluis  "Specific Archaeal communities are selected on the root surfaces of Ruppia spp. and Phragmites australis."  Wetlands  34 (2013):  403-411.
    Martí, E.; Sierra, J.; Cáliz, J.; Montserrat, G.; Vila, X.; Garau, M. A.; Cruañas, R.  "Ecotoxicity of Cr, Cd and Pb on two Mediterranean soils."  Archives of Environmental Contamination and Toxicology  64 (2013):  377-387.
    Plasencia, Anna; Gich, Frederic; Fillol, Mireia; Borrego, Carles M.   "Phylogenetic characterization and quantification of ammonia-oxidizing archaea and bacteria from Lake Kivu in a long-term microcosm incubation."  International Microbiology  16 (2013):  177-189.
    Ramió-Pujol, S.; Bañeras, L.; Artigas, J.; Romaní, A.M.   "Changes of the phenol-degrading bacterial community during the decomposition of submersed Platanus acerifolia leaves."  FEMS Microbiology Letters  338 (2013):  184-191.
    Vilar-Sanz, A., Puig, S., García-Lledó, A., Trias, R., Balaguer, M.D, Colprim, J. and Bañeras Ll.   "Denitrifying bacterial communities affect current production and nitrous oxide accumulation in a Microbial Fuel Cell ."  PLoS One  8 (2013):  e63460-.
    Bañeras, L., Ruiz-Rueda, O., López-Flores, R. & Quintana, X.D.  "The role of plant type and salinity in the selection for the denitrifying community structure in the rhizosphere of wetland vegetation. ."  International Microbiology  15 (2012):  89-99.
    Cáliz, J.; Montserrat, G.; Martí, E.; Sierra, J.; Garau, M. A.; Cruañas, R.; Triadó-Margarit X.; Vila, X.  "The exposition of a calcareous Mediterranean soil to toxic concentrations of Cr, Cd and Pb produces changes in the microbiota mainly related to differential metal bioavailability."  Chemosphere  89 (2012):  594-504.
    Casamayor E.O.; Llirós M.; Picazo A.; Barberán A.; Borrego C.M.; Camacho A.  "Contribution of deep dark fixation processes to overall CO2 incorporation and large vertical changes of microbial populations in stratified karstic lakes."  Aquatic Sciences : Research Across Boundaries  74 (2012):  61-75.
    Frederic Gich, Monika Anna Janys, Melanie König and Jörg Overmann  "Enrichment of previously uncultured bacteria from natural complex communities by adhesion to solid surfaces."  Environmental Microbiology  14 (2012):  2984-2997.
    Gabarró J., Ganigué R., Gich F., Ruscalleda M., Balaguer M.D., Colprim J.  "Effect of temperature on AOB activity of a partial nitritation SBR treating landfill leachate with extremely high nitrogen concentration ."  Bioresource Technology  126 (2012):  283-289.
    Guasch, H., Garcia Acosta, X., Urrea, G. i Bañeras, Ll.  "Changes in the microbial communities along the environmental gradient created by a small Fe spring.."  Freshwater Science  31 (2012):  599-609.
    Martí, E.; Cáliz, J.; Montserrat, G.; Garau, M. A.; Vila, X.; Cruañas, R.; Sierra, J.  "Air-drying, cooling and freezing for soil sample storage affects the activity and the microbial communities from two Mediterranean soils."  Geomicrobiology Journal  29 (2012):  151-160.
    Trias, R., Ruiz-Rueda, O., García-Lledó, A., Vilar-Sanz, A., López-Flores, R., Quintana, X. D., Hallin, S. and Bañeras, L.   "Emergent macrophytes act selectively on ammonia oxidizing bacteria and archaea ."  Applied and Environmental Microbiology  78 (2012):  6352-6356.
    Trias, R; A. García-Lledó; N. Sánchez; J.L. López-Jurado; S. Hallin; L. Bañeras  "Abundance and composition of epiphytic bacterial and archaeal ammonia oxidizers of marine red and brown macroalgae."  Applied and Environmental Microbiology  78 (2012):  318-325.
    Cáliz, J.; Vila, X.; Martí, E.; Sierra J.; Cruañas, R.; Garau, M. A.; Montserrat, G.  "Impact of chlorophenols on microbiota of an unpolluted acidic soil: microbial resistance and biodegradation ."  FEMS Microbiology Ecology  78 (2011):  150-164.
    Cáliz, J.; Vila, X.; Martí, E.; Sierra, J.; Nordgren, J.; Lindgren, P.E.; Bañeras, L.; Montserrat, G.  "The microbiota of an unpolluted calcareous soil faces up chlorophenols: Evidences of resistant strains with potential for bioremediation ."  Chemosphere  83 (2011):  104-116.
    Garcia-Lledó, A.; Bañeras, L.; Ruiz-Rueda, O.; Vilar-Sanz A.; Sala L.  "Nitrogen removal efficiencies in a free water surface constructed wetland in relation to plant coverage."  Ecological Engineering  37 (2011):  678-684.
    García-Lledó, A; Vilar-Sanz, A; Trias, R; Hallin, S; Bañeras, L.  "Genetic potential for N2O emissions from the sediment of a free water surface constructed wetland."  Water Research  45 (2011):  5621 -5632.
    Llirós M.; Alonso-Sáez L.; Gich F.; Plasencia A.; Auguet O.; Casamayor E.O.; Borrego C.M.  "Active bacteria and archaea cells fixing bicarbonate in the dark along the water column of a stratified eutrophic lagoon."  FEMS Microbiology Ecology  77 (2011):  370-384.
    Martí, E.; Sierra, J.; Cáliz, J.; Montserrat, G.; Vila, X.; Garau, M. A.; Cruañas, R.  "Ecotoxicity of chlorophenolic compounds depending on soil characteristics. ."  Science of the Total Environment  409 (2011):  2707-2716.
    Prat, C.; Besalú, E.; Bañeras, L.; Anticó, E.  "Multivariate analysis of volatile compounds detected by headspace solid-phase microextraction/gas chromatography: a tool for sensory classification of cork stoppers ."  Food Chemistry  126 (2011):  1978-1984.
    Puig, S.; Serra, M.; Vilar-Sanz, A.; Cabré, M.; Bañeras, Ll.; Colprim, J.; Balaguer, M.D.   "Autotrophic nitrite removal in the cathode of microbial fuel cells ."  Bioresource Technology  102 (2011):  4462-4467.
    Triadó-Margarit, X.; Vila, X.; Galinski, E.A.  "Osmoadaptative accumulation of N(epsilon)-acetyl-beta-lysine in Green Sulfur Bacteria and Bacillus cereus CECT 148T."  FEMS Microbiology Letters  318 (2011):  159-167.
    Bañeras L.; Ros-Ponsatí M.; Cristina X.P.; García-Gil L.J.; Borrego C.  "Phosphorus deficiency and kinetics of alkaline phosphatase in isolates and natural populations of phototrophic sulphur bacteria ."  FEMS Microbiology Ecology  73 (2010):  243-253.
    Llirós, M.; Gich, F.; Plasencia, A.; Auguet, J.C.; Darchambeau, F.; Casamayor, E.O.; Descy, J.P.; Borrego, C.M.   "Vertical Distribution of Ammonia-Oxidizing Crenarchaeota and Methanogens in the Epipelagic Waters of Lake Kivu ."  Applied and Environmental Microbiology  76 (2010):  6853-6863.
    Plasencia A.; Bañeras L.; Llirós M.; Casamayor E.O.; Borrego C.M.  "Maintenance of previously uncultured freshwater archaea from anoxic waters under laboratory conditions ."  Antonie van Leeuwenhoek  99 (2010):  402-408.
    Triadó-Margarit, X.; Vila, X.; Abella, C.  "Novel Green Sulphur Bacteria phylotypes detected in saline environments: ecophysiological characters versus phylogenetic taxonomy."  Antonie van Leeuwenhoek  97 (2010):  419-431.
    Ganigué, R.; Gabarró,J.; Sànchez-Melsió, A.; Ruscalleda, M.; Lopez, H.; Vila, X.; Colprim, J.; Balaguer, M.D.  "Long-term operation of a partial nitritation pilot plant treating leachate with extremely high ammonium concentration prior to an anammox process ."  Bioresource Technology  100 (2009):  5624-5632.
    Montesinos, E.; Trias, R.; Bañeras, L.; Francés, J.; Cabrefiga, J.; Bonaterra, A.; Badosa, E.  "Qualitat microbiològica dels productes vegatals frescos mínimament processats i desenvolupament de tecnologies de bioconservació mitjançant bacteris de l'àcid làctic."  TECA: Tecnologia i ciència dels aliments; Associació Catalana de Ciències de l'Alimentació  11 (2009):  3-9.
    Prat, C.; Ruiz-Rueda, O.; Trias, R.; Anticó, E.; Capone, D.; Sefton, M.; Bañeras, L.  "Molecular fingerprinting by PCR-denaturing gradient gel electrophoresis reveals differences in the levels of microbial diversity for musty-earthy tainted corks ."  Applied and Environmental Microbiology  75 (2009):  1922-1931.
    Prat, C.; Trias, R.; Culleré, L.; Escudero, A.; Anticó, E.; Bañeras, L.  "Off-odour compounds developed in cork by isolated bacteria and fungi: a gas chromatography-mass spectrometry and gas chromatography-olfactometry study ."  Journal of Agricultural and Food Chemistry  57 (2009):  7473-7479.
    Ruiz-Rueda, O.; Hallin, S.; Bañeras, L.  "Structure and function of denitrifying and nitrifyng bacterial communities in relation to the plant species in a constructed wetland."  FEMS Microbiology Ecology  67 (2009):  308-319.
    Saccà A.; Borrego C.M.; Renda R.; Triadó X.; Bruni V.; Guglielmo L.  "Predation impact of ciliated and flagellated protozoa during a summer bloom of brown sulfur bacteria in a meromictic coastal lake."  FEMS Microbiology Ecology  70 (2009):  42-53.
    Sànchez-Melsió, A.; Cáliz, J.; Balaguer, M.D.; Colprim, J.; Vila, X.  "Development of batch-culture enrichment coupled to molecular detection for screening of natural and man-made environments in search of anammox bacteria for N-removal bioreactors systems ."  Chemosphere  75 (2009):  169-179.
    Serra T.; Borrego C.M.; Quintana X.D.; Calderer L.; López-Flores R.; Colomer J.  "Quantification of the effect of nonphotochemical quenching on the determination of in vivo Chl a from phytoplankton along the water column of a freshwater reservoir ."  Photochemistry and Photobiology  85 (2009):  321-331.
    Ylla, I.; Borrego, C. M.; Romaní, A.M.; Sabater, S.  "Availability of glucose and light modulates the structure and function of a microbial biofilm ."  FEMS Microbiology Ecology  69 (2009):  27-42.
    Auguet, J.C.; Borrego, C.M.; Bañeras, L.; Casamayor. E.O.  "Fingerprinting the genetic diversity of the biotin carboxylase gene (accC) in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark ."  Environmental Microbiology  10 (2008):  2527-2536.
    Koch, I.H.; Gich, F.; Dunfield, P.F.; Overmann, J.  "Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils.."  International Journal of Systematic and Evolutionary Microbiology  58 (2008):  1114-1122.
    Llirós, M.; Casamayor, E.O.; Borrego, C. M.  "High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study ."  FEMS Microbiology Ecology  66 (2008):  331-342.
    Prat, C.; Bañeras, L.; Anticó, E.  "Screening of musty-earthy compounds from tainted cork using water-based soaks followed by headspace solid-phase microextraction and gas chromatography–mass spectrometry ."  European Food Research and Technology  227 (2008):  1085-1090.
    Trias, R.; Badosa, E.; Montesinos, E.; Bañeras, L.  "Bioprotective Leuconostoc strains against Listeria monocytogenes in fresh fruit and vegetables ."  International Journal of Food Microbiology  127 (2008):  91-98.
    Trias, R.; Bañeras, L.; Montesinos, E.; Badosa, E.  "Lactic acid bacteria from fresh fruit and vegetables as biocontrol agents of phytopathogenic bacteria and fungi ."  International Microbiology  11 (2008):  231-236.
    Trias, R.; Bañeras, L.; Badosa, E.; Montesinos, E.  "Bioprotection of Golden Delicious apple and Iceberg lettuce against foodborne bacterial pathogens by lactic acid bacteria ."  International Journal of Food Microbiology  123 (2008):  50-60.
    Casamayor, E.O.; Ferrera, I.; Cristina, X.; Borrego, C.M.; Gasol, J.M.  "Flow cytometric identification and enumeration of photosynthetic sulfur bacteria and potential for ecophysiological studies at the single cell level ."  Environmental Microbiology  9 (2007):  1969-1985.
    Ruiz-Rueda, O.; Trias, R.; Garcia-Gil, L.J.; Bañeras, L.  "Diversity of the nitrite reductase gene nirS in the sediment of a free-water surface constructed wetland ."  International Microbiology  10 (2007):  253-260.
    Trias, R.; Bañeras, L.; Badosa, E.; Montesinos, E.  "Bioprotection of fresh fruits and vegetables against foodborne bacterial pathogens by lactic acid bacteria."  Postharvest Biology and Technology   (2007):  -.
    Vives, M.T.; Colprim, J.; López, H.; Ganigué, R.; Ruscalleda, M.; Sánchez, A.; Vila, X.; López, R.; Llorens, M.J.; Salamero, M.; González, E.; Jiménez, E.; Balaguer, M.D.; Elorduy, M.  "Proyecto CLONIC."  Gestión del Agua  1 (2007):  1-5.
    Gich, F.; Overmann, J.  "Sandarakinorhabdus limnophila gen. nov., sp. nov., a new bacteriochlorophyll a-containing obligately aerobic bacterium isolated from freshwater lakes."  International Journal of Systematic and Evolutionary Microbiology  56 (2006):  847-854.
    Pšenčík, J.; Arellano, J.B.; Ikonen, T.P.; Borrego, C.M.; Laurinmäki, P.A.; Butcher, S.A.; Serimaa, R.E.; Tuma, R.  "Internal structure of chlorosomes from brown-colored Chlorobium species and the role of carotenoids in their assembly ."  Biophysical Journal  91 (2006):  1433-1440.
    Flors, C.; Prat, C.; Suau, R.; Nonell, S.  "Photochemistry of phytoalexins containing phenalenone-like chromophores: photophysics and singlet oxygen photosensitizing properties of the plant oxoaporphine alkaloid oxoglaucine ."  Photochemistry and Photobiology  81 (2005):  120-124.
    Gich, F.; Schubert, K.; Hoffelner, H.; Bruns, A.; Overmann, J.  "Specific detection, isolation, and characterization of selected, previously uncultured members of the freshwater bacterioplankton community ."  Applied and Environmental Microbiology  71 (2005):  5908-5919.
    Mallorquí, N.; Arellano, J.B.; Borrego, C.M.; Garcia-Gil, L.J.  "Signature pigments of green sulfur bacteria in lower Pleistocene deposits from the Banyoles lacustrine area (Spain)."  Journal of Paleolimnology  34 (2005):  271-280.
    Calvó, L.; Vila, X.; Abella, C.A.; Garcia-Gil, L.J.  "Use of the ammonia-oxidizing bacterial-specific phylogenetic probe Nso1225 as a primer for fingerprint analysis of ammonia-oxidizer communities ."  Applied Microbiology and Biotechnology  63 (2004):  715-721.
    Garcia-Gil, L.J.; Gich, F.; Fuentes-Garcia, X.  "A comparative study of bchG from green photosynthetic bacteria ."  Archives of Microbiology  179 (2003):  108-115.
    Gich, F.; Lairs, R.; Danielsen, M.; Keely, B.J.; Abella, C.; Garcia-Gil, L.J.; Miller, M.; Borrego, C.M.  "Characterization of the chlorosome antenna of the filamentous anoxygenic phototrophic bacterium Chloronema strain UdG9001 ."  Archives of Microbiology  180 (2003):  417-426.
    Serra, T.; Colomer, J.; Soler, M.; Vila, X.  "Spatio-temporal heterogeneity in a planktonic Thiocystis minor population, studied by laser in situ particle analysis ."  Freshwater Biology  48 (2003):  698-708.
    Airs, R.L.; Borrego, C.M.; Garcia-Gil, L.J.; Keely, B.J.  "Identification of the Bacteriochlorophyll homologs of Chlorobium phaeobacteroides strain UdG6053 grown at light limitation ."  Photosynthesis Research  70 (2002):  221-230.
    Arellano, J.B.; Melø, T.B.; Borrego, C.B.; Naqvi, K.R.  "Bacteriochlorophyll e monomers, but not aggregates, sensitize singlet oxygen: implications for a self-photoprotection mechanism in chlorosomes ."  Photochemistry and Photobiology  76 (2002):  9-16.
    Borrego, C.M.; Vila, X.P.  "Bacterias fototróficas del azufre ."  Investigación y ciencia  315 (2002):  36-37.
    Camacho, A.; Vicente, E.;Garcia-Gil, L.J.; Miracle, M.R.; Sendra, M.D.; Vila, X.; Borrego, C.M.  "Factors determining changes in the abundance and distribution of micro-, nano-, and picoplankton in Lake El Tobar (Central Spain)."  Verhandlungen des Internationalen Verein Limnologie  28 (2002):  1-7.
    Glaeser, J.; Bañeras, I.; Rütters, H.; Overmann, J.  "Novel bacteriochlorophyll e structures and species-specific variability of pigment composition in green sulfur bacteria ."  Archives of Microbiology  177 (2002):  475-485.
    Martinez, A.; Arellano, J.B.; Borrego, C.M.; Lopez-Iglesias, C.; Gich, F.; García-Gil, L.J.  "Topography and biometrics of chlorosomes by atomic force microscopy and freeze-drying for transmission electron microscopy ."  Photosynthesis Research  71 (2002):  83-90.
    Vila, X.; Guyoneaud, R.; Cristina, X.P.; Figueras, J.B.; Abella, C.A.  "Green Sulfur Bacteria from Chiprana Lake (Monegros, Spain): habitat description, characterisation of isolated strains and phylogenetic relationship of isolated strains ."  Photosynthesis Research  71 (2002):  165-172.
    Arellano, J.B.; Borrego, C. M.; Martinez-Planells, A.; Garcia-Gil, L.J.  "Effect of carotenoid deficiency on cells and chlorosomes of Chlorobium phaeobacteroides ."  Archives of Microbiology  175 (2001):  226-233.
    Gich, F.; Borrego, C. M.; Martinez-Planells, A.; Steensgaard, D.B.; Holzwarth, A.R.; Garcia-Gil, L.J.  "Variability of the photosynthetic antenna of a Pelodictyon clathratiforme population from a freshwater holomictic pond ."  FEMS Microbiology Ecology  37 (2001):  11-19.
    Gich, F.; Garcia-Gil, L.J.; Overmann, J.   "Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes ."  Archives of Microbiology  177 (2001):  1-10.
    Guyoneaud, R.; Borrego, C. M.; Martinez-Planells, A.; Buitenhuis, E.T.; Garcia-Gil, L.J.   "Light responses in the green sulfur bacterium Prosthecochloris aestuarii: changes in prosthecae length, ultrastructure, and antenna pigment composition ."  Archives of Microbiology  176 (2001):  278-284.
    Serra, T.; Colomer, J.; Casamitjana, X.; Cristina, X.; Vila, X.; Arellano, J.B.  "Evaluation of a laser in situ scattering instrument for measuring the concentration of phytoplankton, purple sulphur bacteria and suspended inorganic sediments in lakes ."  Journal of Environmental Engineering-Asce  127 (2001):  1023-1030.
    Vila, X.; Abella, C.  "Light-harvesting adaptations of planktonic phototrophic microorganisms to different light quality conditions."  Hydrobiologia  452 (2001):  15-30.
    Arellano, J.; Melo, T.; Borrego, C.M.; Garcia-Gil, L.J.; Naqvi, K.R.   "Nanosecond laser photolysis studies of chlorosomes and artificial aggregates containing bacteriochlorophyll e: evidence for the proximity of carotenoids and bacteriochlorophyhll a in chlorosomes from Chlorobium phaeobacteroides strain CL1401 ."  Photochemistry and Photobiology  72 (2000):  669-675.
    Arellano, J.B.; Psencik, J.; Borrego, C.M.; Ma, Y.Z.; Guyoneaud, R.; Garcia-Gil, L.J.; Gillbro, T.  "Effect of carotenoid biosynthesis inhibition on the chlorosome organization in Chlorobium phaeobacteroides strain CL1401 ."  Photochemistry and Photobiology  71 (2000):  715-723.
    Bañeras, L.; Rodríguez-González, J.; Garcia-Gil, L.J.  "Evaluation of soluble phosphate as a factor determining the growth of sulfur photosynthetic bacteria in an eutrophic holomictic lake."  Verhandlungen des Internationalen Verein Limnologie  27 (2000):  850-853.
    Casamayor, E.O.; Schäfer, H.; Bañeras, L.; Pedrós-Alió, C.; Muyzer, G.  "Identification and spatio-temporal differences in microbial assemblages of two neighboring sulfurous lakes induced by different environmental conditions."  Applied and Environmental Microbiology  66 (2000):  499-508.
    Cristina, X.P.; Vila, X.; Abella, C.A.; Bañeras, L.  "Anoxygenic phototrophic sulfur bacteris in Moncortés Lake (Spain): the deepest population of Chromatium sp.."  Verhandlungen des Internationalen Verein Limnologie  27 (2000):  854-858.
    Garcia-Gil L.J.; Bañeras L.; Rodríguez-González J.; Borrego C.M.  "Are phototrophic sulphur bacteria phosphate-limited?."  Verhandlungen des Internationalen Verein Limnologie  27 (2000):  840-843.
    Gich, F.B.; Amer, E.; Figueras, J.B.; Abella, C.A.; Balaguer, M.D.; Poch, M.  "Assessment of microbial community structure changes by amplified ribosomal DNA restriction analysis (ARDRA) ."  International Microbiology  3 (2000):  103-106.
    Steensgaard D.B.; van Walreee C.A.; Permentier H.; Bañeras L.; Borrego C.M.; Garcia-Gil L.J.; Amesz J.; Holzwarth A.R.  "Fast energy transfer between BChl d and BChl c revealed in chlorosomes of the green sulfur bacterium Chlorobium limicola."  Biochimica et Biophysica Acta  1457 (2000):  71-80.
    Bañeras L.; Borrego C.M; Garcia-Gil L.J.  "Growth-rate dependent bacteriochlorophyll c/d rate in the antenna of Chlorobium limicola strain UdG6040."  Archives of Microbiology  171 (1999):  350-354.
    Bañeras, L.; Rodriguez-Gonzalez, J.; Garcia-Gil, L.J.  "Contribution of photosynthetic sulfur bacteria to alkaline phosphatase activity in anoxic aquatic environment.."  Aquatic Microbial Ecology  18 (1999):  15-22.
    Borrego C.M.; Arellano J.B.; Abella C.A.; Gillbro T.; Garcia-Gil L.J.  "The molar extinction coefficient of bacteriochlorophyll e and the pigment stoichiometry in Chlorobium phaeobacteroides."  Photosynthesis Research  60 (1999):  257-264.
    Borrego C.M.; Bañeras L.; Garcia-Gil L.J.  "Temporal variability of Chlorobium phaeobacteroides antenna pigments in a meromictic karstic lake.."  Aquatic Microbial Ecology  17 (1999):  121-129.
    Borrego C.M.; Miller M.; Gerola P.D.; Cox R.P  "Light intensity effects on pigment composition and organisation in the thermophilic green sulfur bacterium Chlorobium tepidum."  Photosynthesis Research  59 (1999):  159-166.
    Garcia-Gil L.J.; Vicente E.; Camacho A.; Borrego C.M.; Vila X.; Cristina X.P.; Rodriguez-Gonzalez J.  "Vertical distribution of photosynthetic sulphur bacteria linked to saline gradients in Lake 'El Tobar' (Cuenca, Spain)."  Aquatic Microbial Ecology  20 (1999):  299-303.
    Steensgaard D.B.; Van Walree C.A.; Bañeras L.; Borrego C.M.; Garcia-Gil L.J.; Holzwarth A.  "Evidence for spatially separate bacteriochlorophyll c and bacteriochlorophyll d pools within the chlorosomal aggregate of Chlorobium limicola."  Photosynthesis Research  59 (1999):  231-234.
    Vila, X.; Abella, C.  "Spectroradiometric identification of phototrophic microorganisms in planktonic aquatic environments."  Aquatic Microbial Ecology  20 (1999):  225-230.
    Vila, X.; Cristina, X.P.; Abella, C.; Hurley, J.P.  "Effects of gilvin on the composition and dynamics of metalimnetic communities of phototrophic bacteria in freshwater North-American lakes."  Journal of Applied Microbiology  85 (1999):  138-150.
    Abella, C.A.; Cristina, X.P.; Martinez, A.; Pibernat, I.V.; Vila, X.  "Two new motile phototrophic consortia: 'Chlorochromatium lunatum' and 'Pelochromatium selenoides'."  Archives of Microbiology  169 (1998):  452-459.
    Bañeras, L.; Garcia-Gil, L.J.  "Environmental and physiological factors affecting the uptake of phosphate by Chlorobium limicola."  Archives of Microbiology  170 (1998):  252-258.
    Borrego C.M.; Garcia-Gil L.J.; Cristina P.; Vila X.; Abella C.A.  "Occurrence of new BChl d forms in natural populations of green photosynthetic sulfur bacteria."  FEMS Microbiology Ecology  26 (1998):  257-267.
    Vila, X.; Figueras, J.B.; Abella, C.; Hurley, J.P.  "Vertical models of phototrophic bacterial distribution in the metalimnetic microbial communities of several freshwater North-American kettle lakes."  FEMS Microbiology Ecology  25 (1998):  287-299.
    Borrego C.M.; Garcia-Gil L.J.  "Sorption of metals by Chlorobium spp."  Microbiología : publicación de la Sociedad Española de Microbiología  13 (1997):  445-452.
    Borrego C.M.; Garcia-Gil L.J.; Vila X.; Cristina X.P.; Figueras J.B.; Abella C.A.  "Distribution of bacteriochlorophyll homologs in natural populations of brown-coloured photosynthetic sulfur bacteria."  FEMS Microbiology Ecology  24 (1997):  301-309.
    Gich, F.; Garcia-Gil, L.J.  "Efecto del potencial redox sobre la velocidad de reducción de los nitratos.."  Tecnología del Agua  161 (1997):  51-56.
    Bañeras, L.; Garcia-Gil, L.J.  "Role of photosynthetic microbial populations on the phosphorous exchange through the oxic-anoxic boundary in a meromictic eutrophic lake."  Archives of Hydrobiology  48 (1996):  171-181.
    Vila X.; Dokulil M.; Garcia-Gil L.J.; Abella C.A.; Borrego C.M.; Bañeras L.  "Composition and distribution of phototrophic bacterioplankton in the deep communities of several centereuropean lakes: the role of light quality."  Archives of Hydrobiology  48 (1996):  183-196.
    Vila, X.; Colomer, J.; Garcia-Gil, L.J.  "Modelling spectral irradiance in freshwater in relation to phytoplankton and solar radiation."  Ecological Modelling  87 (1996):  59-68.
    Borrego C.M.; Garcia-Gil L.J.   "Photosynthetic oxidation of MnS and FeS by Chlorobium spp.."  Microbiología : publicación de la Sociedad Española de Microbiología  11 (1995):  351-358.
    Borrego C.M.; Garcia-Gil L.J.  "Rearrangement of light harvesting bacteriochlorophyll homologs as a response of Green Photosynthetic Bacteria to low light intensities."  Photosynthesis Research  45 (1995):  21-30.
    Verdú N.; Triola I.; Borrego C.M.; Garcia-Gil L.J.  "Efecte d'una mescla estival episòdica en la dinàmica i estructura de la comunitat de microorganismes fotosintètics planctònics en l'estanyol del Sisó."  Scientia gerundensis  21 (1995):  71-84.
    Borrego C.M.; Garcia-Gil L.J.  "Caracterización limnológica de la Coromina (Sant Miquel de Campmajor, Girona) una laguna hipereutrófica del sistema lacustre de Banyoles."  Limnética  10 (1994):  43-51.
    Borrego C.M.; Garcia-Gil L.J.  "Separation of bacteriochlorophyll homologs by reversed-phase High Performance Liquid Chromatography."  Photosynthesis Research  41 (1994):  157-163.
    Vila, X.; Abellà, C.  "Clima lumínico y fotosíntesis en las masas de agua de la zona lacustre de Banyoles."  Quaderns del CECB  1 (1994):  33-55.
    Vila, X.; Abella, C.A.  "Effects of light quality on the physiology and the ecology of Green Sulfur Bacteria in the water column of lakes."  Photosynthesis Research  41 (1994):  53-65.
    X. Vila i L. Vilar  "Vegetación de humedales en restauración en el Parque Natural de la Garrotxa (Girona) ."  Anais do Instituto Superior de Agronomia  XLIV (1994):  695-710.
    Bañeras, L.; Brunet, R.  "Càrrega de nutrients per tributaris torrencials a l'Estanyol del Vilar (Banyoles) durant tres períodes de precipitació (hivern 1991-1992)."  Scientia gerundensis  19 (1993):  11-21.
    Borrego C.M.; Garcia-Gil L.J  "Separation of chlorophyll a and bacteriochlorophyll c from mixed extracts by reversed-phase HPLC."  Scientia gerundensis  19 (1993):  23-34.
    Borrego C.M.; Garcia-Gil L.J.; Bañeras L.J.; Brunet R.C.  "Changes in the composition of sulfur bacterial communities in the three basins of Lake Banyoles (Spain)."  Ver. Int. Verein. Limnol.  25 (1993):  720-725.
    Brunet R.; Bañeras L.; Borrego C.M.  "Dilution as a restoration method in the eutrophic Lake Vilar (Banyoles, Spain)."  Verhandlungen des Internationalen Verein Limnologie  25 (1993):  735-738.
    Garcia-Gil L.J.; Borrego C.M.; Bañeras L.; Abella C.A.  "Dynamics of phototrophic microbial populations in the chemocline of a meromictic basin of Lake Banyoles."  Internationale Revue der Gesamten Hydrobiologie  78 (1993):  283-294.
    Vila, X.; Abella, C.A.  "Comparison of light spectral distribution in some waterbodies of Banyoles area (Girona, Spain)."  Verhandlungen des Internationalen Verein Limnologie  25 (1993):  100-104.
    Vila, X.; Garcia-Gil, L.J.  "Caracterización de una laguna surgente en la zona lacustre de Banyoles: la laguna pequeña de la Cendra.."  Scientia gerundensis  19 (1993):  5-10.
    Vilar, L.; Polo, L.; Vila, X.  "El mapa de la vegetació de l'estany de Banyoles ."  Scientia gerundensis  17 (1991):  29-35.
    Vila, X.; Abellà, C.  "Las surgencias del llano de Usall."  Quaderns del CECB  1 (1990):  7-22.
    Vila, X.; Vilar. L.; Polo, L.  "La vegetació macrófita del Clot d'Espolla (Girona) ."  Scientia gerundensis  16 (1990):  205-210.
    Vila, X.; Abella, C.; Brusi, D.  "Caracterización morfológica y limnológica del Clot d'Espolla y las surgencias del llano de Usall."  Scientia gerundensis  14 (1989):  23-42.
    Garcia-Gil L. J.; Borrego C.M.; Hugas L.; Casamitjana X.; Abella C.A.  "Horizontal distribution of a phototrophic bacterial population in an irregularly-shaped meromictic basin of Lake Banyoles (Banyoles, Spain)."  Scientia gerundensis  14 (1988):  71-79.
    Vila, X.; Torrent, C.; Moreno-Amich, R.; Abella, C.  "Evaluación de indicadores físico-químicos de contaminación en los canales de salida del lago de Banyoles (Girona).."  Scientia gerundensis  13 (1987):  53-65.


    Article de divulgació
    Lluís Corominas; Carles Borrego; Mònica Escolà; Pablo Gago-Ferrero; Mira Petrovic; Sara Rodríguez-Mozaz; Nicole Schröter; Ivan Senta; Ian Zammit  "Epidemiología y sociología basadas en el análisis de las aguas residuales."  Tecnoaqua  42 (2020):  84-88.


    Article pendent de publicació
    Jéssica Subirats; Elena Royo; José Luís Balcázar; Carles M. Borrego  "Real-time PCR assays for the detection and quantification of carbapenemase genes (blaKPC, blaNDM and blaOXA-48) in environmental samples."  Environmental Science and Pollution Research   (2017):  6710-6714.


    Notes breus
    Bañeras, L.; Gich, F.; Martinez-Medina, M.; Miller, M.; Abella, C.A.; Borrego, C. M.  "New phylotypes of mesophilic filamentous anoxygenic phototrophic bacteria enriched from sulfide-containing environments ."  Environmental Microbiology Reports  1 (2009):  86-93.


    Blasco-Gómez, Ramiro; Batlle-Vilanova, Pau; Bañeras, Lluís; Balaguer, Maria Dolors; Colprim, Jesús; Puig, Sebastià Puig  "Microbial electrochemical technology (MET) platform for turning carbon dioxide into a suitable substrate for a chain-elongation fermenter."  New Biotechnology  44 (2018):  -.


    Review (Ressenyes i Recensions)
    Sergi Sabater; Xisca Timoner; Carles M. Borrego; Vicenç Acuña  "Stream Biofilm Responses to Flow Intermittency: From Cells to Ecosystems."  Frontiers in Microbiology  4 (2016):  -.
    Balcázar, J.L.; Subirats, J.; Borrego, C.M.  "The role of biofilms as environmental reservoirs of antibiotic resistance."  Frontiers in Microbiology  6 (2015):  -.
    Ramió-Pujol, S.; Ganigué, R; Bañeras, L.; Colprim, J.  "How can alcohol production be improved in carboxydotrophic Clostridia?."  Process Biochemistry   (2015):  -.



    Source of the data: System of information GREC